Basic Information
Locus ID:
Oco06G019480
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Protein tyrosine kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG06 | 21489502 | 21493935 | + | Oco06G019480 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.92 | 41,617.08 Da | 21.93 | 81.80 | -0.33 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 77 | 349 | 7.9851E-110 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 72 | 349 | 2.5E-59 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 60 | 350 | 6.07E-75 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 60 | 154 | 9.6E-20 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 176 | 358 | 3.5E-60 | - |
| SMART | SM00220 | serkin_6 | 71 | 352 | 3.7E-60 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 71 | 352 | 41.318642 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 216 | 228 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 172 | 185 | 1.8E-15 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 276 | 298 | 1.8E-15 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 210 | 228 | 1.8E-15 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 320 | 342 | 1.8E-15 | IPR001245 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G22750.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_052149894.1 | serine/threonine-protein kinase STY13-like [Oryza glaberrima] | 0 |
| Q9SSA4 | Serine/threonine-protein kinase 54 OS=Arabidopsis thaliana OX=3702 GN=CBC1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6G1E4V3 | Protein kinase domain-containing protein OS=Oryza meyeriana var. granulata OX=110450 GN=E2562_030014 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology