Basic Information
Locus ID:
Oco06G019410
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Short Name:
NEK1
Description:
Kinase-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG06 | 21400792 | 21407034 | - | Oco06G019410 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.21 | 65,455.27 Da | 53.95 | 82.00 | -0.44 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd08215 | STKc_Nek | 3 | 258 | 4.60576E-136 | - |
| Pfam | PF00069 | Protein kinase domain | 4 | 257 | 7.5E-64 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 1 | 315 | 1.62E-83 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1 | 83 | 1.0E-21 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 84 | 272 | 8.8E-58 | - |
| SMART | SM00220 | serkin_6 | 4 | 258 | 3.4E-82 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 4 | 258 | 45.869789 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 125 | 137 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 10 | 33 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 499 | 516 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 297 | 317 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 297 | 314 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 496 | 527 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G04810.1 | NIMA-related kinase 2. Encodes AtNek2, a member of the NIMA-related serine/threonine kinases (Neks) that have been linked to cell-cycle regulation in fungi and mammals. Plant Neks might be involved in plant development processes. | 0 |
| RefSeq | XP_006650325.1 | serine/threonine-protein kinase Nek1-like [Oryza brachyantha] | 0 |
| Q10GB1 | Serine/threonine-protein kinase Nek1 OS=Oryza sativa subsp. japonica OX=39947 GN=NEK1 PE=2 SV=1 | 0 | |
| TrEMBL | J3LR00 | Protein kinase domain-containing protein OS=Oryza brachyantha OX=4533 GN=102712065 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology