Basic Information
Locus ID:
Oco06G017000
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Short Name:
MUB1
Description:
May serve as docking site to facilitate the association of other proteins to the plasma membrane
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG06 | 16193637 | 16197402 | - | Oco06G017000 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.39 | 12,955.05 Da | 43.82 | 74.41 | -0.37 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01814 | Ubl_MUBs_plant | 7 | 94 | 2.71495E-44 | - |
| Pfam | PF13881 | Ubiquitin-2 like Rad60 SUMO-like | 8 | 116 | 5.1E-41 | IPR039540 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 5 | 94 | 3.21E-24 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 1 | 100 | 1.4E-36 | - |
| PIRSF | PIRSF032572 | MUB | 1 | 118 | 2.1E-46 | IPR017000 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 8 | 74 | 9.242867 | IPR000626 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G22050.1 | membrane-anchored ubiquitin-fold protein 6 precursor. | 0 |
| RefSeq | XP_006650211.1 | membrane-anchored ubiquitin-fold protein 1 [Oryza brachyantha] | 0 |
| Q75GT2 | Membrane-anchored ubiquitin-fold protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=MUB1 PE=3 SV=1 | 0 | |
| TrEMBL | J3LPY5 | Membrane-anchored ubiquitin-fold protein OS=Oryza brachyantha OX=4533 GN=102702175 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology