Basic Information
Locus ID:
Oco06G016050
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
von Willebrand factor type A domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG06 | 15108618 | 15110849 | - | Oco06G016050 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.31 | 22,802.54 Da | 40.18 | 97.68 | -0.21 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00092 | von Willebrand factor type A domain | 102 | 209 | 1.9E-13 | IPR002035 |
| SUPERFAMILY | SSF53300 | vWA-like | 100 | 208 | 3.41E-17 | IPR036465 |
| Gene3D | G3DSA:3.40.50.410 | von Willebrand factor, type A domain | 102 | 211 | 6.6E-22 | IPR036465 |
| ProSiteProfiles | PS50234 | VWFA domain profile. | 102 | 211 | 10.552243 | IPR002035 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 43 | 66 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_015630236.1 | probable E3 ubiquitin-protein ligase EDA40 [Oryza sativa Japonica Group] | 0 |
| TrEMBL | A0A0E0KEV0 | VWFA domain-containing protein OS=Oryza punctata OX=4537 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology