Basic Information
Locus ID:
Oco06G015960
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Protein tyrosine kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG06 | 14983235 | 14988984 | + | Oco06G015960 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.69 | 83,320.27 Da | 50.13 | 74.78 | -0.56 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06410 | PB1_UP2 | 42 | 136 | 5.51835E-38 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 570 | 703 | 8.6E-29 | IPR001245 |
| Pfam | PF00564 | PB1 domain | 56 | 124 | 6.3E-10 | IPR000270 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 523 | 735 | 1.8E-51 | IPR011009 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 54 | 142 | 8.93E-20 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 59 | 137 | 5.0E-8 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 508 | 742 | 5.8E-55 | - |
| SMART | SM00220 | serkin_6 | 524 | 733 | 2.6E-19 | IPR000719 |
| SMART | SM00666 | PB1_new | 53 | 138 | 8.1E-20 | IPR000270 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 524 | 743 | 22.704163 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 615 | 627 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 530 | 551 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 9 | 24 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 184 | 211 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 438 | 457 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 24 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G24715.1 | Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain. | 0 |
| RefSeq | XP_015690837.1 | probable LIM domain-containing serine/threonine-protein kinase DDB_G0287001 isoform X2 [Oryza brachyantha] | 0 |
| Q9SAJ2 | RAF-like serine/threonine-protein kinase 20 OS=Arabidopsis thaliana OX=3702 GN=RAF20 PE=1 SV=1 | 0 | |
| TrEMBL | J3LPK5 | Protein kinase domain-containing protein OS=Oryza brachyantha OX=4533 GN=102715554 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology