Basic Information
Locus ID:
Oco06G015830
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Short Name:
CAX2
Description:
Belongs to the Ca(2 ) cation antiporter (CaCA) (TC 2.A.19) family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG06 | 14820258 | 14824314 | + | Oco06G015830 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.86 | 46,497.81 Da | 41.49 | 113.04 | 0.58 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01699 | Sodium/calcium exchanger protein | 91 | 246 | 1.1E-20 | IPR004837 |
| Pfam | PF01699 | Sodium/calcium exchanger protein | 279 | 418 | 2.9E-20 | IPR004837 |
| Gene3D | G3DSA:1.20.1420.30 | - | 268 | 422 | 1.6E-18 | IPR044880 |
| Gene3D | G3DSA:1.20.1420.30 | - | 120 | 265 | 1.4E-16 | IPR044880 |
| TIGRFAM | TIGR00846 | caca2: calcium/proton exchanger | 60 | 421 | 3.1E-119 | - |
| TIGRFAM | TIGR00378 | cax: calcium/proton exchanger | 71 | 421 | 3.1E-105 | IPR004798 |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G55730.1 | cation exchanger 5. member of Low affinity calcium antiporter CAX2 family | 0 |
| RefSeq | XP_006650169.1 | vacuolar cation/proton exchanger 2 isoform X1 [Oryza brachyantha] | 0 |
| Q5KQN0 | Vacuolar cation/proton exchanger 2 OS=Oryza sativa subsp. japonica OX=39947 GN=CAX2 PE=2 SV=2 | 0 | |
| TrEMBL | J3LPJ0 | Vacuolar cation/proton exchanger OS=Oryza brachyantha OX=4533 GN=102713995 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology