Basic Information
Locus ID:
Oco06G014520
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
WD40-like Beta Propeller Repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG06 | 13347992 | 13357854 | - | Oco06G014520 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.82 | 60,826.06 Da | 36.18 | 67.76 | -0.54 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07676 | WD40-like Beta Propeller Repeat | 58 | 84 | 0.14 | IPR011659 |
| Pfam | PF07676 | WD40-like Beta Propeller Repeat | 313 | 343 | 0.01 | IPR011659 |
| Pfam | PF07676 | WD40-like Beta Propeller Repeat | 381 | 395 | 5.6E-5 | IPR011659 |
| SUPERFAMILY | SSF82171 | DPP6 N-terminal domain-like | 19 | 448 | 7.32E-24 | - |
| Gene3D | G3DSA:2.120.10.30 | - | 18 | 128 | 5.3E-7 | IPR011042 |
| Gene3D | G3DSA:2.120.10.30 | - | 290 | 452 | 2.2E-18 | IPR011042 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G21680.1 | DPP6 N-terminal domain-like protein. | 0 |
| RefSeq | XP_015690582.1 | uncharacterized protein LOC102704685 [Oryza brachyantha] | 0 |
| TrEMBL | J3LN72 | DPPIV_N domain-containing protein OS=Oryza brachyantha OX=4533 GN=102704685 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology