Basic Information
Locus ID:
Oco06G013870
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG06 | 12549064 | 12554262 | - | Oco06G013870 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.20 | 106,844.61 Da | 40.09 | 84.79 | -0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 650 | 915 | 8.4696E-89 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 648 | 913 | 8.8E-46 | IPR001245 |
| SUPERFAMILY | SSF52058 | L domain-like | 71 | 410 | 1.7E-47 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 630 | 925 | 4.78E-75 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 616 | 719 | 2.6E-33 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 41 | 200 | 1.1E-39 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 720 | 939 | 7.8E-57 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 201 | 420 | 1.6E-34 | IPR032675 |
| SMART | SM00220 | serkin_6 | 644 | 917 | 1.3E-27 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 644 | 918 | 37.869946 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 764 | 776 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 650 | 672 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 922 | 958 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 922 | 938 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G79620.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_040378093.1 | leucine-rich repeat receptor protein kinase HPCA1 [Oryza brachyantha] | 0 |
| Q8GZ99 | Leucine-rich repeat receptor protein kinase HPCA1 OS=Arabidopsis thaliana OX=3702 GN=HPCA1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6G1E9W9 | Protein kinase domain-containing protein OS=Oryza meyeriana var. granulata OX=110450 GN=E2562_009782 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology