Basic Information
Locus ID:
Oco06G012710
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
C-terminus of AA_permease
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG06 | 11475990 | 11477533 | - | Oco06G012710 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.48 | 26,754.42 Da | 38.31 | 66.49 | -0.56 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 23 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_015691872.2 | LOW QUALITY PROTEIN: F-box protein At3g57580-like [Oryza brachyantha] | 0 |
| TrEMBL | A0A0D9ZW09 | FBA_3 domain-containing protein OS=Oryza glumipatula OX=40148 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Lolium multiflorum | 3 | gene-QYE76_035428, gene-QYE76_035432, gene-QYE76_049662 |
| Poaceae | Oryza coarctata | 1 | Oco06G012710 |
| Poaceae | Oryza sativa | 2 | LOC_Os03g23040.1, LOC_Os05g14290.1 |
| Poaceae | Puccinellia tenuiflora | 3 | Pt_Chr0204291, Pt_Chr0204295, Pt_Chr0401115 |