Basic Information
Locus ID:
Oco06G012100
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Serine/Threonine protein kinases, catalytic domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG06 | 10977027 | 10984484 | - | Oco06G012100 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.82 | 65,285.19 Da | 41.28 | 85.16 | -0.25 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 135 | 397 | 1.32437E-128 | - |
| Pfam | PF00069 | Protein kinase domain | 136 | 398 | 1.9E-68 | IPR000719 |
| SUPERFAMILY | SSF47473 | EF-hand | 426 | 580 | 1.44E-15 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 134 | 446 | 4.05E-82 | IPR011009 |
| Gene3D | G3DSA:1.10.238.10 | - | 438 | 507 | 2.3E-15 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 132 | 222 | 8.4E-24 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 418 | 577 | 2.3E-15 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 223 | 417 | 5.9E-59 | - |
| SMART | SM00220 | serkin_6 | 136 | 398 | 1.3E-96 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 136 | 398 | 50.039318 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 260 | 272 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 142 | 168 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 54 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G41140.1 | CDPK-related kinase 1. Encodes CDPK-related kinase 1 (CRK1). | 0 |
| RefSeq | XP_015689907.2 | calcium/calmodulin-dependent serine/threonine-protein kinase 1 [Oryza brachyantha] | 0 |
| Q10KY3 | Calcium/calmodulin-dependent serine/threonine-protein kinase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=CAMK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6G1DHJ7 | Protein kinase domain-containing protein OS=Oryza meyeriana var. granulata OX=110450 GN=E2562_012764 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology