Basic Information
Locus ID:
Oco06G011480
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG06 | 10333929 | 10339697 | - | Oco06G011480 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.21 | 112,647.14 Da | 45.93 | 75.51 | -0.61 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01366 | KISc_C_terminal | 397 | 726 | 6.07733E-167 | - |
| Pfam | PF00307 | Calponin homology (CH) domain | 40 | 159 | 1.3E-14 | IPR001715 |
| Pfam | PF00225 | Kinesin motor domain | 405 | 723 | 1.6E-105 | IPR001752 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 399 | 757 | 3.65E-118 | IPR027417 |
| SUPERFAMILY | SSF47576 | Calponin-homology domain, CH-domain | 38 | 172 | 3.86E-24 | IPR036872 |
| Gene3D | G3DSA:1.10.418.10 | - | 25 | 177 | 7.9E-29 | IPR036872 |
| Gene3D | G3DSA:3.40.850.10 | Kinesin motor domain | 340 | 726 | 7.6E-132 | IPR036961 |
| SMART | SM00033 | ch_5 | 40 | 158 | 3.6E-9 | IPR001715 |
| SMART | SM00129 | kinesin_4 | 397 | 732 | 3.1E-163 | IPR001752 |
| ProSiteProfiles | PS50067 | Kinesin motor domain profile. | 399 | 724 | 120.391991 | IPR001752 |
| ProSiteProfiles | PS50021 | Calponin homology (CH) domain profile. | 38 | 160 | 18.207621 | IPR001715 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 674 | 695 | 2.0E-38 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 472 | 493 | 2.0E-38 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 594 | 611 | 2.0E-38 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 625 | 643 | 2.0E-38 | IPR001752 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 890 | 911 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 182 | 197 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 973 | 1016 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 953 | 1016 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 890 | 926 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 181 | 202 | - | - |
| Coils | Coil | Coil | 731 | 751 | - | - |
| Coils | Coil | Coil | 256 | 276 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G47500.1 | P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain. | 0 |
| RefSeq | XP_052148912.1 | kinesin-like protein KIN-14F [Oryza glaberrima] | 0 |
| Q10MN5 | Kinesin-like protein KIN-14F OS=Oryza sativa subsp. japonica OX=39947 GN=KIN14F PE=2 SV=2 | 0 | |
| TrEMBL | A0A6G1CQW4 | Kinesin-4 OS=Oryza meyeriana var. granulata OX=110450 GN=E2562_014453 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology