Basic Information
Locus ID:
Oco06G010070
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG06 | 9119269 | 9127002 | + | Oco06G010070 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.93 | 95,819.37 Da | 46.34 | 82.71 | -0.31 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd15489 | PHD_SF | 611 | 673 | 2.07401E-4 | - |
| Pfam | PF16135 | Tify domain binding domain | 226 | 277 | 9.9E-9 | IPR032308 |
| Pfam | PF16135 | Tify domain binding domain | 507 | 554 | 1.7E-14 | IPR032308 |
| SUPERFAMILY | SSF55729 | Acyl-CoA N-acyltransferases (Nat) | 717 | 841 | 1.81E-9 | IPR016181 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 570 | 685 | 1.3E-5 | IPR013083 |
| Gene3D | G3DSA:3.40.630.30 | - | 708 | 858 | 3.7E-6 | - |
| SMART | SM00249 | PHD_3 | 611 | 674 | 1.0E-4 | IPR001965 |
| ProSiteProfiles | PS51186 | Gcn5-related N-acetyltransferase (GNAT) domain profile. | 708 | 861 | 11.708855 | IPR000182 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 388 | 414 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 44 | 66 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G37520.1 | Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain. | 0 |
| RefSeq | XP_040378061.1 | uncharacterized protein LOC102718159 isoform X1 [Oryza brachyantha] | 0 |
| F4IXE7 | Increased DNA methylation 1 OS=Arabidopsis thaliana OX=3702 GN=IDM1 PE=1 SV=1 | 0 | |
| TrEMBL | J3LMI6 | N-acetyltransferase domain-containing protein OS=Oryza brachyantha OX=4533 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology