Basic Information
Locus ID:
Oco06G007020
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Wall-associated receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG06 | 6209126 | 6211417 | - | Oco06G007020 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.43 | 65,600.80 Da | 39.01 | 76.67 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00054 | EGF_CA | 301 | 329 | 8.64288E-6 | - |
| Pfam | PF07645 | Calcium-binding EGF domain | 301 | 330 | 2.1E-7 | IPR001881 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 437 | 576 | 3.1E-12 | IPR001245 |
| Pfam | PF13947 | Wall-associated receptor kinase galacturonan-binding | 35 | 82 | 4.4E-8 | IPR025287 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 348 | 430 | 1.2E-12 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 346 | 578 | 4.98E-42 | IPR011009 |
| SUPERFAMILY | SSF57196 | EGF/Laminin | 301 | 331 | 6.14E-7 | - |
| Gene3D | G3DSA:2.10.25.10 | Laminin | 301 | 334 | 5.5E-9 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 336 | 416 | 3.1E-18 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 434 | 582 | 7.8E-26 | - |
| SMART | SM00179 | egfca_6 | 301 | 338 | 3.6E-5 | IPR001881 |
| SMART | SM00179 | egfca_6 | 251 | 289 | 0.96 | IPR001881 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 340 | 581 | 14.84566 | IPR000719 |
| ProSiteProfiles | PS50026 | EGF-like domain profile. | 251 | 289 | 8.851407 | IPR000742 |
| ProSitePatterns | PS00022 | EGF-like domain signature 1. | 277 | 288 | - | IPR000742 |
| ProSitePatterns | PS01186 | EGF-like domain signature 2. | 277 | 288 | - | IPR000742 |
| ProSitePatterns | PS01187 | Calcium-binding EGF-like domain signature. | 301 | 326 | - | IPR018097 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G21240.2 | - | 0 |
| RefSeq | XP_034576745.1 | wall-associated receptor kinase 4-like [Setaria viridis] | 0 |
| Q9LSV3 | Putative wall-associated receptor kinase-like 16 OS=Arabidopsis thaliana OX=3702 GN=WAKL16 PE=3 SV=1 | 0 | |
| TrEMBL | K4AI80 | Protein kinase domain-containing protein OS=Setaria italica OX=4555 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology