Basic Information
Locus ID:
Oco06G006990
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG06 | 6176771 | 6181859 | + | Oco06G006990 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.45 | 50,232.65 Da | 45.31 | 80.34 | -0.40 |
Protein Domain:
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_052146549.1 | uncharacterized protein LOC127765649 [Oryza glaberrima] | 0 |
| TrEMBL | A0A0E0KAN3 | F-box domain-containing protein OS=Oryza punctata OX=4537 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 2 | BH05.1139, CH01.5106 |
| Poaceae | Eleusine coracana subsp. coracana | 11 | gene-QOZ80_2AG0111130, gene-QOZ80_2BG0159870 ... |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.3HG0296530.1 |
| Poaceae | Oryza coarctata | 2 | Oco05G006790, Oco06G006990 |
| Poaceae | Oryza sativa | 3 | LOC_Os03g12190.1, LOC_Os03g12200.1, LOC_Os03g12210.1 |
| Poaceae | Sporobolus alterniflorus | 4 | Chr02G013590, Chr05G020180, Chr20G002810, Chr24G001980 |