Basic Information
Locus ID:
Oco06G006930
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Homocysteine S-methyltransferase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG06 | 6126948 | 6129977 | + | Oco06G006930 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.16 | 43,211.41 Da | 48.31 | 87.33 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02574 | Homocysteine S-methyltransferase | 17 | 260 | 5.7E-57 | IPR003726 |
| SUPERFAMILY | SSF82282 | Homocysteine S-methyltransferase | 12 | 271 | 1.57E-58 | IPR036589 |
| Gene3D | G3DSA:3.20.20.330 | - | 5 | 299 | 1.8E-76 | IPR036589 |
| ProSiteProfiles | PS50970 | Homocysteine-binding domain profile. | 4 | 329 | 32.908024 | IPR003726 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 319 | 342 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 294 | 342 | - | - |
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G25900.2 | Homocysteine S-methyltransferase family protein. | 0 |
| RefSeq | XP_015632081.1 | homocysteine S-methyltransferase 1 [Oryza sativa Japonica Group] | 0 |
| Q9FUN0 | Homocysteine S-methyltransferase 1 OS=Zea mays OX=4577 GN=HMT-1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0E0KAN4 | Hcy-binding domain-containing protein OS=Oryza punctata OX=4537 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology