Basic Information
Locus ID:
Oco06G003570
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
KIP1-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG06 | 3055546 | 3066683 | + | Oco06G003570 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.09 | 281,099.06 Da | 50.01 | 91.51 | -0.66 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07765 | KIP1-like protein | 15 | 88 | 4.8E-35 | IPR011684 |
| SUPERFAMILY | SSF57997 | Tropomyosin | 221 | 443 | 4.25E-5 | - |
| SUPERFAMILY | SSF57997 | Tropomyosin | 1088 | 1268 | 2.09E-5 | - |
| ProSiteProfiles | PS51774 | Networked (NET) actin-binding (NAB) domain profile. | 14 | 94 | 47.843426 | IPR011684 |
| Coils | Coil | Coil | 310 | 344 | - | - |
| Coils | Coil | Coil | 373 | 393 | - | - |
| Coils | Coil | Coil | 1168 | 1188 | - | - |
| Coils | Coil | Coil | 212 | 253 | - | - |
| Coils | Coil | Coil | 527 | 572 | - | - |
| Coils | Coil | Coil | 401 | 449 | - | - |
| Coils | Coil | Coil | 1476 | 1503 | - | - |
| Coils | Coil | Coil | 804 | 824 | - | - |
| Coils | Coil | Coil | 1739 | 1759 | - | - |
| Coils | Coil | Coil | 1802 | 1822 | - | - |
| Coils | Coil | Coil | 1084 | 1139 | - | - |
| Coils | Coil | Coil | 2365 | 2399 | - | - |
| Coils | Coil | Coil | 1266 | 1293 | - | - |
| Coils | Coil | Coil | 965 | 1006 | - | - |
| Coils | Coil | Coil | 1553 | 1584 | - | - |
| Coils | Coil | Coil | 916 | 957 | - | - |
| Coils | Coil | Coil | 671 | 698 | - | - |
| Coils | Coil | Coil | 860 | 887 | - | - |
| Coils | Coil | Coil | 475 | 523 | - | - |
| Coils | Coil | Coil | 1238 | 1258 | - | - |
| Coils | Coil | Coil | 2027 | 2047 | - | - |
| Coils | Coil | Coil | 629 | 649 | - | - |
| Coils | Coil | Coil | 1869 | 1903 | - | - |
| Coils | Coil | Coil | 1953 | 1980 | - | - |
| Coils | Coil | Coil | 734 | 775 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G22790.1 | Kinase interacting (KIP1-like) family protein. | 0 |
| RefSeq | XP_015630890.1 | protein NETWORKED 1A [Oryza sativa Japonica Group] | 0 |
| Q9LUI2 | Protein NETWORKED 1A OS=Arabidopsis thaliana OX=3702 GN=NET1A PE=1 SV=1 | 0 | |
| TrEMBL | A0A0E0NQ03 | NAB domain-containing protein OS=Oryza rufipogon OX=4529 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology