Basic Information
Locus ID:
Oco06G003350
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG06 | 2881245 | 2883351 | - | Oco06G003350 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.07 | 17,451.29 Da | 62.79 | 105.89 | 0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_052150283.1 | uncharacterized protein LOC127768696 [Oryza glaberrima] | 0 |
| TrEMBL | A2XCP7 | F-box protein OS=Oryza sativa subsp. indica OX=39946 GN=OsI_10082 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 10 | AH01.175, BH03.1193, BH03.3926, BH03.3928, BH05.3403 ... |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_3AG0211990, gene-QOZ80_3AG0212950 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.5HG0517850.1 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_061269 |
| Poaceae | Oryza coarctata | 2 | Oco06G002870, Oco06G003350 |
| Poaceae | Thinopyrum elongatum | 2 | Tel5E01G249800, Tel5E01G674400 |
| Poaceae | Triticum dicoccoides | 6 | gene_TRIDC5AG024010, gene_TRIDC5AG055580 ... |
| Poaceae | Triticum aestivum | 13 | TraesCS5A02G142800.1, TraesCS5A02G380200.1 ... |