Basic Information
Locus ID:
Oco06G002710
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG06 | 2341963 | 2345073 | - | Oco06G002710 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.83 | 109,018.77 Da | 35.05 | 99.77 | 0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00560 | Leucine Rich Repeat | 508 | 530 | 0.92 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 716 | 986 | 1.7E-34 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 267 | 327 | 1.8E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 532 | 591 | 2.6E-8 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 35 | 72 | 8.1E-10 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 61 | 279 | 5.44E-46 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 711 | 989 | 4.51E-61 | IPR011009 |
| SUPERFAMILY | SSF52047 | RNI-like | 256 | 596 | 1.1E-72 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 34 | 181 | 4.8E-38 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 380 | 627 | 6.3E-70 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 278 | 379 | 5.0E-33 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 182 | 277 | 2.0E-24 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 805 | 1012 | 3.8E-48 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 704 | 804 | 5.5E-16 | - |
| SMART | SM00369 | LRR_typ_2 | 434 | 458 | 170.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 554 | 578 | 130.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 338 | 362 | 25.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 290 | 314 | 22.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 506 | 530 | 140.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 194 | 218 | 12.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 459 | 482 | 320.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 714 | 989 | 8.3E-23 | IPR000719 |
| ProSiteProfiles | PS51257 | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 23 | 5.0 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 714 | 996 | 30.788811 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 720 | 744 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 851 | 863 | - | IPR008271 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 509 | 522 | 7.5E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 554 | 567 | 7.5E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G28650.1 | Leucine-rich repeat transmembrane protein kinase family protein. | 0 |
| RefSeq | XP_040378700.1 | MDIS1-interacting receptor like kinase 1-like [Oryza brachyantha] | 0 |
| Q9M0G7 | MDIS1-interacting receptor like kinase 1 OS=Arabidopsis thaliana OX=3702 GN=MIK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6G1DNQ8 | Protein kinase domain-containing protein OS=Oryza meyeriana var. granulata OX=110450 GN=E2562_024606 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology