Basic Information
Locus ID:
Oco06G001240
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
NAC domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG06 | 1096123 | 1097149 | + | Oco06G001240 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.37 | 23,431.65 Da | 50.07 | 69.86 | -0.62 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14358 | UBA_NAC_euk | 181 | 217 | 7.425E-17 | - |
| Pfam | PF01849 | NAC domain | 78 | 133 | 2.3E-21 | IPR002715 |
| Pfam | PF19026 | HYPK UBA domain | 179 | 217 | 5.3E-11 | IPR044034 |
| Gene3D | G3DSA:1.10.8.10 | - | 179 | 216 | 2.4E-19 | - |
| Gene3D | G3DSA:2.20.70.30 | - | 84 | 137 | 1.5E-30 | IPR038187 |
| SMART | SM01407 | NAC_2 | 78 | 134 | 5.8E-25 | IPR002715 |
| ProSiteProfiles | PS51151 | NAC A/B domain profile. | 75 | 140 | 17.778694 | IPR002715 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 159 | 179 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 41 | 65 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 17 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 86 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G12390.1 | Nascent polypeptide-associated complex (NAC), alpha subunit family protein. | 0 |
| RefSeq | XP_015631186.1 | nascent polypeptide-associated complex subunit alpha-like protein 1 [Oryza sativa Japonica Group] | 0 |
| Q9LHG9 | Nascent polypeptide-associated complex subunit alpha-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=At3g12390 PE=1 SV=1 | 0 | |
| TrEMBL | B9FAI7 | Os03g0121700 protein OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0121700 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology