Basic Information
Locus ID:
Oco06G000610
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Short Name:
DRM2
Description:
DNA (cytosine-5)-methyltransferase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG06 | 510953 | 514952 | + | Oco06G000610 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.01 | 69,868.88 Da | 43.87 | 74.40 | -0.37 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14330 | UBA_atDRM2_like | 182 | 220 | 2.6615E-11 | - |
| Pfam | PF00145 | C-5 cytosine-specific DNA methylase | 503 | 617 | 2.5E-10 | IPR001525 |
| SUPERFAMILY | SSF53335 | S-adenosyl-L-methionine-dependent methyltransferases | 308 | 499 | 1.2E-23 | IPR029063 |
| SUPERFAMILY | SSF46934 | UBA-like | 167 | 208 | 4.2E-7 | IPR009060 |
| SUPERFAMILY | SSF53335 | S-adenosyl-L-methionine-dependent methyltransferases | 503 | 618 | 6.78E-19 | IPR029063 |
| Gene3D | G3DSA:3.40.50.150 | Vaccinia Virus protein VP39 | 297 | 404 | 2.4E-5 | - |
| Gene3D | G3DSA:3.40.50.150 | Vaccinia Virus protein VP39 | 466 | 630 | 3.9E-28 | - |
| Gene3D | G3DSA:1.10.8.10 | - | 162 | 225 | 4.8E-7 | - |
| ProSiteProfiles | PS51679 | C-5 cytosine-specific DNA methylase (Dnmt) domain profile. | 503 | 632 | 20.8218 | IPR001525 |
| ProSiteProfiles | PS50030 | Ubiquitin-associated domain (UBA) profile. | 179 | 221 | 10.739612 | IPR015940 |
| ProSiteProfiles | PS51680 | SAM-dependent methyltransferase DRM-type domain profile. | 300 | 626 | 134.517715 | IPR030380 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 20 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 51 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 255 | 275 | - | - |
Gene Ontology
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G14620.1 | domains rearranged methyltransferase 2. A putative DNA methyltransferase with rearranged catalytic domains; similar to mammalian DNMT3 methyltransferases; contains UBA domains. The 3'-end proximal part of the gene coding region is highly methylated at both adenine and cytosine residues. | 0 |
| RefSeq | XP_015690693.1 | DNA (cytosine-5)-methyltransferase DRM2-like [Oryza brachyantha] | 0 |
| Q10SU5 | DNA (cytosine-5)-methyltransferase DRM2 OS=Oryza sativa subsp. japonica OX=39947 GN=DRM2 PE=1 SV=1 | 0 | |
| TrEMBL | J3LJ60 | SAM-dependent MTase DRM-type domain-containing protein OS=Oryza brachyantha OX=4533 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology