Basic Information
Locus ID:
Oco05G028720
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
The B regulatory subunit might modulate substrate selectivity and catalytic activity, and also might direct the localization of the catalytic enzyme to a particular subcellular compartment
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG05 | 32589810 | 32594378 | + | Oco05G028720 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.43 | 59,296.70 Da | 52.81 | 91.47 | -0.33 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01603 | Protein phosphatase 2A regulatory B subunit (B56 family) | 84 | 494 | 8.0E-186 | IPR002554 |
| SUPERFAMILY | SSF48371 | ARM repeat | 96 | 477 | 1.85E-156 | IPR016024 |
| Gene3D | G3DSA:1.25.10.10 | - | 91 | 493 | 3.0E-193 | IPR011989 |
| PIRSF | PIRSF028043 | PP2A_B56 | 9 | 517 | 1.2E-243 | IPR002554 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 29 | 53 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 53 | - | - |
| Coils | Coil | Coil | 462 | 482 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Pathway:
ko03015 (mRNA surveillance pathway)
map03015 (mRNA surveillance pathway)
ko04071 (Sphingolipid signaling pathway)
map04071 (Sphingolipid signaling pathway)
ko04113 (Meiosis - yeast)
map04113 (Meiosis - yeast)
ko04114 (Oocyte meiosis)
map04114 (Oocyte meiosis)
ko04151 (PI3K-Akt signaling pathway)
map04151 (PI3K-Akt signaling pathway)
ko04152 (AMPK signaling pathway)
map04152 (AMPK signaling pathway)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G26020.1 | Protein phosphatase 2A regulatory B subunit family protein. Encodes protein phosphatase 2A (PP2A) B'eta subunit. Targeted to nucleus and cytosol. | 0 |
| RefSeq | XP_015632260.1 | serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' theta isoform [Oryza sativa Japonica Group] | 0 |
| Q9LU89 | Serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' eta isoform OS=Arabidopsis thaliana OX=3702 GN=B'ETA PE=1 SV=1 | 0 | |
| TrEMBL | A0A0P0W5X9 | Serine/threonine protein phosphatase 2A regulatory subunit OS=Oryza sativa subsp. japonica OX=39947 GN=OSJNBa0032G11.16 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology