Basic Information
Locus ID:
Oco05G028270
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Translocase of chloroplast 159/132, membrane anchor domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG05 | 32250832 | 32256113 | + | Oco05G028270 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.66 | 129,231.75 Da | 42.00 | 77.91 | -0.45 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF11886 | Translocase of chloroplast 159/132, membrane anchor domain | 914 | 1176 | 3.2E-96 | IPR024283 |
| Pfam | PF04548 | AIG1 family | 564 | 698 | 1.2E-22 | IPR006703 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 554 | 695 | 1.51E-19 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 534 | 783 | 2.0E-56 | IPR027417 |
| TIGRFAM | TIGR00993 | 3a0901s04IAP86: chloroplast protein import component Toc86/159, G and M domains | 454 | 1185 | 2.9E-255 | IPR005690 |
| ProSiteProfiles | PS51720 | AIG1-type G domain profile. | 561 | 792 | 28.658785 | IPR006703 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 95 | 116 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 13 | 80 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 63 | 80 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 18 | 37 | - | - |
| Coils | Coil | Coil | 868 | 895 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G02510.1 | translocon at the outer envelope membrane of chloroplasts 159. An integral membrane GTPase that functions as a transit-sequence receptor required for the import of proteins necessary for chloroplast biogenesis. Located in the outer chloroplast membrane. Phosphorylation of the G-domains regulate translocon assembly. | 0 |
| RefSeq | XP_052147727.1 | translocase of chloroplast 101, chloroplastic-like [Oryza glaberrima] | 0 |
| O81283 | Translocase of chloroplast 159, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TOC159 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0E0KL66 | AIG1-type G domain-containing protein OS=Oryza punctata OX=4537 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology