Basic Information
Locus ID:
Oco05G027100
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG05 | 31332449 | 31336522 | - | Oco05G027100 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.54 | 42,053.10 Da | 41.30 | 86.04 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 63 | 318 | 2.43659E-114 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 59 | 318 | 9.4E-61 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 48 | 334 | 9.59E-79 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 139 | 362 | 1.2E-56 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 46 | 136 | 1.2E-20 | - |
| SMART | SM00220 | serkin_6 | 57 | 322 | 8.2E-69 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 57 | 322 | 44.018234 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 177 | 189 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 63 | 84 | - | IPR017441 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 245 | 267 | 1.3E-10 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 289 | 311 | 1.3E-10 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 171 | 189 | 1.3E-10 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 133 | 146 | 1.3E-10 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 22 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G01850.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_015632851.1 | serine/threonine-protein kinase HT1 [Oryza sativa Japonica Group] | 0 |
| Q2MHE4 | Serine/threonine/tyrosine-protein kinase HT1 OS=Arabidopsis thaliana OX=3702 GN=HT1 PE=1 SV=1 | 0 | |
| TrEMBL | A2XNC6 | Protein kinase domain-containing protein OS=Oryza sativa subsp. indica OX=39946 GN=OsI_14061 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology