Basic Information
Locus ID:
Oco05G023970
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG05 | 28536364 | 28541640 | - | Oco05G023970 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.87 | 113,715.06 Da | 43.91 | 103.19 | 0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 777 | 1045 | 1.2256E-91 | - |
| Pfam | PF13855 | Leucine rich repeat | 516 | 575 | 8.7E-9 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 151 | 211 | 1.2E-10 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 588 | 607 | 0.22 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 774 | 971 | 3.9E-41 | IPR000719 |
| SUPERFAMILY | SSF52058 | L domain-like | 484 | 667 | 2.81E-33 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 750 | 1042 | 1.62E-73 | IPR011009 |
| SUPERFAMILY | SSF52047 | RNI-like | 92 | 430 | 2.98E-51 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 33 | 193 | 1.2E-33 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 285 | 403 | 3.0E-23 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 194 | 284 | 5.8E-25 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 404 | 683 | 1.1E-46 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 732 | 846 | 4.5E-26 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 847 | 1048 | 6.5E-56 | - |
| SMART | SM00369 | LRR_typ_2 | 586 | 610 | 11.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 352 | 376 | 92.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 562 | 585 | 75.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 128 | 151 | 28.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 198 | 222 | 1.9 | IPR003591 |
| SMART | SM00220 | serkin_6 | 771 | 1023 | 2.9E-31 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 174 | 197 | 83.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 246 | 270 | 40.0 | IPR003591 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 354 | 375 | 7.072797 | IPR001611 |
| ProSiteProfiles | PS51257 | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 24 | 6.0 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 771 | 1045 | 38.463573 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 891 | 903 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 777 | 799 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 586 | 599 | 3.0E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 249 | 262 | 3.0E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G02130.2 | - | 0 |
| RefSeq | XP_006650609.1 | LRR receptor-like serine/threonine-protein kinase RPK2 [Oryza brachyantha] | 0 |
| Q9S7I6 | LRR receptor-like serine/threonine-protein kinase RPK2 OS=Arabidopsis thaliana OX=3702 GN=RPK2 PE=1 SV=1 | 0 | |
| TrEMBL | J3LSY5 | Protein kinase domain-containing protein OS=Oryza brachyantha OX=4533 GN=102700972 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology