Basic Information
Locus ID:
Oco05G023560
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG05 | 28173769 | 28177484 | + | Oco05G023560 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.15 | 61,910.93 Da | 45.93 | 70.43 | -0.66 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14136 | STKc_SRPK | 53 | 482 | 0.0 | - |
| Pfam | PF00069 | Protein kinase domain | 319 | 482 | 1.7E-20 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 63 | 204 | 2.6E-20 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 60 | 493 | 5.78E-83 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 146 | 483 | 3.7E-79 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 39 | 145 | 2.6E-39 | - |
| SMART | SM00220 | serkin_6 | 63 | 482 | 7.1E-57 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 63 | 482 | 31.438976 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 190 | 202 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 69 | 92 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 276 | 290 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 45 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 211 | 313 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 31 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 291 | 313 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 530 | 556 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 530 | 550 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 481 | 510 | - | - |
| Coils | Coil | Coil | 1 | 21 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G53030.1 | ser/arg-rich protein kinase 4. Encodes a protein kinase SRPK4 that specifically targets Arabidopsis Ser/Arg-rich (SR) slicing factors involved in RNA metabolism. In vitro kinase assay showed that SRPK4 phosphorylates the SR protein RSp31. | 0 |
| RefSeq | XP_015630587.1 | SRSF protein kinase 1 [Oryza sativa Japonica Group] | 0 |
| Q45FA5 | Serine/threonine-protein kinase SRPK OS=Physarum polycephalum OX=5791 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0D9ZD50 | Protein kinase domain-containing protein OS=Oryza glumipatula OX=40148 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology