Basic Information
Locus ID:
Oco05G021880
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG05 | 26489638 | 26493616 | - | Oco05G021880 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.92 | 102,217.80 Da | 32.80 | 85.69 | -0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 611 | 883 | 3.90075E-97 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 37 | 75 | 6.1E-4 | IPR013210 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 345 | 378 | 0.062 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 608 | 837 | 3.0E-49 | IPR001245 |
| SUPERFAMILY | SSF52058 | L domain-like | 71 | 450 | 5.61E-50 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 582 | 892 | 1.95E-80 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 683 | 901 | 4.9E-58 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 566 | 682 | 3.0E-37 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 341 | 466 | 2.5E-28 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 36 | 337 | 5.4E-77 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 427 | 451 | 54.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 605 | 891 | 4.0E-47 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 124 | 147 | 0.017 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 271 | 295 | 140.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 198 | 226 | 94.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 605 | 886 | 40.993561 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 730 | 742 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 611 | 633 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 938 | 960 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 470 | 492 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 466 | 492 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G66150.1 | transmembrane kinase 1. receptor-like transmembrane kinase I (TMK1) | 0 |
| RefSeq | XP_052147977.1 | receptor protein kinase TMK1-like [Oryza glaberrima] | 0 |
| P43298 | Receptor protein kinase TMK1 OS=Arabidopsis thaliana OX=3702 GN=TMK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0E0KI93 | Protein kinase domain-containing protein OS=Oryza punctata OX=4537 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology