Basic Information
Locus ID:
Oco05G021820
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Speckle-type POZ protein-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG05 | 26418690 | 26419420 | - | Oco05G021820 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.86 | 22,840.07 Da | 56.31 | 71.41 | -0.35 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18186 | BTB_POZ_ZBTB_KLHL-like | 84 | 152 | 3.22305E-14 | - |
| Pfam | PF00651 | BTB/POZ domain | 83 | 161 | 1.7E-12 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 83 | 202 | 5.1E-15 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 72 | 202 | 3.7E-18 | IPR011333 |
| SMART | SM00225 | BTB_4 | 83 | 206 | 3.4E-11 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 83 | 158 | 13.901349 | IPR000210 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_052135358.1 | BTB/POZ and MATH domain-containing protein 2-like [Oryza glaberrima] | 0 |
| TrEMBL | Q53P97 | BTB/POZ domain, putative OS=Oryza sativa subsp. japonica OX=39947 GN=LOC_Os11g24550 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
No orthogroup found for Oco05G021820.