Basic Information
Locus ID:
Oco05G021720
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG05 | 26293944 | 26297234 | - | Oco05G021720 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.22 | 72,149.57 Da | 43.27 | 92.07 | -0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 124 | 183 | 4.4E-7 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 381 | 641 | 1.1E-35 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 37 | 71 | 7.5E-6 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 382 | 643 | 1.07E-54 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 62 | 217 | 3.2E-32 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 357 | 452 | 5.8E-19 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 453 | 673 | 2.2E-45 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 144 | 222 | 7.1E-16 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 38 | 143 | 2.7E-20 | IPR032675 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 378 | 647 | 29.785297 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 384 | 406 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 653 | 687 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 657 | 679 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G48480.1 | receptor-like kinase 1. Arabidopsis thaliana receptor-like protein kinase (RKL1) gene | 0 |
| RefSeq | XP_006651742.2 | probable inactive receptor kinase At1g48480 [Oryza brachyantha] | 0 |
| Q9LP77 | Probable inactive receptor kinase At1g48480 OS=Arabidopsis thaliana OX=3702 GN=RKL1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6G1DDL2 | Protein kinase domain-containing protein OS=Oryza meyeriana var. granulata OX=110450 GN=E2562_001450 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology