Basic Information
Locus ID:
Oco05G020570
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Short Name:
CPK30
Description:
EF-hand domain pair
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG05 | 24967470 | 24975074 | + | Oco05G020570 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.79 | 64,873.39 Da | 34.93 | 82.23 | -0.45 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00051 | EFh | 482 | 544 | 3.31688E-16 | IPR002048 |
| CDD | cd00051 | EFh | 411 | 469 | 1.84742E-16 | IPR002048 |
| CDD | cd05117 | STKc_CAMK | 104 | 362 | 5.96259E-133 | - |
| Pfam | PF00069 | Protein kinase domain | 105 | 363 | 1.0E-68 | IPR000719 |
| Pfam | PF13499 | EF-hand domain pair | 481 | 544 | 4.6E-13 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 409 | 470 | 9.1E-11 | IPR002048 |
| SUPERFAMILY | SSF47473 | EF-hand | 391 | 576 | 6.87E-44 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 101 | 364 | 9.58E-84 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 191 | 371 | 9.8E-59 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 107 | 190 | 1.4E-24 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 372 | 547 | 5.2E-52 | - |
| SMART | SM00220 | serkin_6 | 105 | 363 | 1.7E-93 | IPR000719 |
| SMART | SM00054 | efh_1 | 482 | 510 | 0.69 | IPR002048 |
| SMART | SM00054 | efh_1 | 446 | 474 | 0.077 | IPR002048 |
| SMART | SM00054 | efh_1 | 518 | 546 | 1.0E-6 | IPR002048 |
| SMART | SM00054 | efh_1 | 410 | 438 | 6.5E-6 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 514 | 549 | 14.736568 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 406 | 441 | 15.322372 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 105 | 363 | 47.438663 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 442 | 477 | 10.245409 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 478 | 513 | 11.919133 | IPR002048 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 419 | 431 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 491 | 503 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 455 | 467 | - | IPR018247 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 111 | 134 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 225 | 237 | - | IPR008271 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 527 | 539 | - | IPR018247 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 49 | 66 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 10 | 70 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 14 | 33 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G18890.1 | calcium-dependent protein kinase 1. encodes a calcium-dependent protein kinase whose gene expression is induced by dehydration and high salt. Kinase activity could not be detected in vitro. | 0 |
| RefSeq | XP_040377649.1 | calcium-dependent protein kinase 9 [Oryza brachyantha] | 0 |
| Q6AVI8 | Calcium-dependent protein kinase 9 OS=Oryza sativa subsp. japonica OX=39947 GN=CPK9 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6G1DR72 | Calcium-dependent protein kinase 30 OS=Oryza meyeriana var. granulata OX=110450 GN=E2562_033702 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology