HalophFGD

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Basic Information
Locus ID: Oco05G019790
Species & Taxonomic ID: Oryza coarctata & 77588
Genome Assembly: GCA_030770085.1
Description:
Maps and Mapping Data
Chromosome Start End Strand ID
LG05 24034109 24036834 + Oco05G019790
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
9.15 27,148.04 Da 75.76 59.67 -0.70
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
ProSiteProfiles PS51257 Prokaryotic membrane lipoprotein lipid attachment site profile. 1 24 6.0 -
MobiDBLite mobidb-lite consensus disorder prediction 207 244 - -
MobiDBLite mobidb-lite consensus disorder prediction 166 189 - -
Best hit
Source Best Hit ID Description E-value
RefSeq XP_052150311.1 uncharacterized protein LOC127768723 [Oryza glaberrima] 0
TrEMBL A0A0D9ZBB6 F-box domain-containing protein OS=Oryza glumipatula OX=40148 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Poaceae Echinochloa crus-galli 51 AH01.1015, AH01.1024, AH01.1124, AH01.1153, AH01.4125 ...
AH01.780, AH02.1490, AH03.332, AH04.548, AH05.1982, AH05.1998, BH01.1138, BH01.1156, BH01.1227, BH01.1228, BH01.1251, BH01.1255, BH01.1320, BH01.1323, BH01.733, BH02.1566, BH02.2878, BH04.1785, BH04.1985, BH04.2098, BH04.711, BH04.718, BH09.189, CH01.1212, CH01.1213, CH01.1296, CH01.1297, CH01.1298, CH01.1370, CH01.1701, CH01.1704, CH01.1851, CH01.1857, CH01.4167, CH01.4693, CH01.731, CH01.941, CH02.1709, CH02.3660, CH04.2428, CH04.592, CH05.1059, CH05.2658, CH09.1680, CH09.201, Contig309.89
Poaceae Eleusine coracana subsp. coracana 51 gene-QOZ80_3AG0214390, gene-QOZ80_3AG0216010 ...
gene-QOZ80_3AG0218380, gene-QOZ80_3AG0221420, gene-QOZ80_3AG0222470, gene-QOZ80_3AG0223650, gene-QOZ80_3AG0224920, gene-QOZ80_3AG0235940, gene-QOZ80_3AG0243540, gene-QOZ80_3AG0243570, gene-QOZ80_3AG0249230, gene-QOZ80_3BG0259470, gene-QOZ80_3BG0261290, gene-QOZ80_3BG0263620, gene-QOZ80_3BG0266550, gene-QOZ80_3BG0266560, gene-QOZ80_3BG0266860, gene-QOZ80_3BG0267300, gene-QOZ80_3BG0267480, gene-QOZ80_3BG0268430, gene-QOZ80_3BG0268570, gene-QOZ80_3BG0268700, gene-QOZ80_3BG0270180, gene-QOZ80_3BG0278950, gene-QOZ80_3BG0284660, gene-QOZ80_4AG0301210, gene-QOZ80_4AG0306520, gene-QOZ80_4AG0327400, gene-QOZ80_4AG0327410, gene-QOZ80_4BG0331950, gene-QOZ80_4BG0331960, gene-QOZ80_4BG0348650, gene-QOZ80_4BG0359340, gene-QOZ80_4BG0359350, gene-QOZ80_4BG0359360, gene-QOZ80_5AG0362010, gene-QOZ80_5AG0390790, gene-QOZ80_5BG0438870, gene-QOZ80_6AG0525610, gene-QOZ80_6AG0533630, gene-QOZ80_8AG0616010, gene-QOZ80_8AG0616390, gene-QOZ80_8AG0640640, gene-QOZ80_8AG0641140, gene-QOZ80_8BG0643460, gene-QOZ80_8BG0643930, gene-QOZ80_9AG0683810, gene-QOZ80_9AG0691240, gene-QOZ80_9BG0693890, gene-QOZ80_9BG0694470, gene-QOZ80_9BG0709820
Poaceae Hordeum vulgare 24 HORVU.MOREX.r3.1HG0064420.1, HORVU.MOREX.r3.2HG0106700.1 ...
HORVU.MOREX.r3.2HG0174920.1, HORVU.MOREX.r3.3HG0222660.1, HORVU.MOREX.r3.3HG0296840.1, HORVU.MOREX.r3.3HG0296850.1, HORVU.MOREX.r3.3HG0296880.1, HORVU.MOREX.r3.3HG0319310.1.CDS1, HORVU.MOREX.r3.3HG0324120.1, HORVU.MOREX.r3.4HG0334400.1, HORVU.MOREX.r3.4HG0342960.1, HORVU.MOREX.r3.4HG0386520.1, HORVU.MOREX.r3.5HG0427890.1, HORVU.MOREX.r3.5HG0441400.1, HORVU.MOREX.r3.5HG0493980.1.CDS1, HORVU.MOREX.r3.5HG0493990.1, HORVU.MOREX.r3.5HG0510610.1.CDS1, HORVU.MOREX.r3.6HG0542900.1, HORVU.MOREX.r3.6HG0542910.1.CDS1, HORVU.MOREX.r3.6HG0550730.1, HORVU.MOREX.r3.7HG0646860.1, HORVU.MOREX.r3.7HG0646870.1.CDS1, HORVU.MOREX.r3.7HG0648070.1, HORVU.MOREX.r3.7HG0650800.1
Poaceae Lolium multiflorum 83 gene-QYE76_000591, gene-QYE76_000593, gene-QYE76_000599 ...
gene-QYE76_000617, gene-QYE76_000618, gene-QYE76_000619, gene-QYE76_000629, gene-QYE76_000630, gene-QYE76_000631, gene-QYE76_000632, gene-QYE76_000634, gene-QYE76_000642, gene-QYE76_007963, gene-QYE76_007964, gene-QYE76_007965, gene-QYE76_007966, gene-QYE76_007967, gene-QYE76_007969, gene-QYE76_007970, gene-QYE76_008050, gene-QYE76_013106, gene-QYE76_013107, gene-QYE76_013108, gene-QYE76_013109, gene-QYE76_014130, gene-QYE76_014455, gene-QYE76_015870, gene-QYE76_015915, gene-QYE76_016195, gene-QYE76_016783, gene-QYE76_017868, gene-QYE76_018486, gene-QYE76_019415, gene-QYE76_019426, gene-QYE76_019680, gene-QYE76_019685, gene-QYE76_019690, gene-QYE76_020540, gene-QYE76_023403, gene-QYE76_026090, gene-QYE76_026091, gene-QYE76_026098, gene-QYE76_026275, gene-QYE76_026284, gene-QYE76_026285, gene-QYE76_034672, gene-QYE76_035480, gene-QYE76_035574, gene-QYE76_036662, gene-QYE76_037521, gene-QYE76_037664, gene-QYE76_038920, gene-QYE76_039204, gene-QYE76_039205, gene-QYE76_044112, gene-QYE76_047575, gene-QYE76_051552, gene-QYE76_057287, gene-QYE76_057978, gene-QYE76_058361, gene-QYE76_059052, gene-QYE76_059842, gene-QYE76_062412, gene-QYE76_062897, gene-QYE76_063023, gene-QYE76_063027, gene-QYE76_063055, gene-QYE76_063074, gene-QYE76_063076, gene-QYE76_063178, gene-QYE76_063475, gene-QYE76_063486, gene-QYE76_063621, gene-QYE76_063983, gene-QYE76_063984, gene-QYE76_064964, gene-QYE76_064965, gene-QYE76_064967, gene-QYE76_067644, gene-QYE76_068082, gene-QYE76_069230, gene-QYE76_070535, gene-QYE76_071537
Poaceae Oryza coarctata 20 Oco02G024440, Oco05G010060, Oco05G019260, Oco05G019790 ...
Oco05G019870, Oco05G019880, Oco05G019900, Oco06G020690, Oco07G009270, Oco12G010210, Oco14G002850, Oco14G010420, Oco16G013130, Oco20G009680, Oco21G003930, Oco21G008790, Oco22G004760, Oco22G010070, Oco22G010080, Oco24G002600
Poaceae Oryza sativa 31 LOC_Os01g60920.1, LOC_Os02g05600.1, LOC_Os03g24200.1 ...
LOC_Os03g43060.1, LOC_Os03g43330.1, LOC_Os03g44920.1, LOC_Os03g44980.1, LOC_Os03g46120.1, LOC_Os03g46140.1, LOC_Os03g46500.1, LOC_Os03g46510.1, LOC_Os03g46530.1, LOC_Os03g46690.1, LOC_Os03g46720.1, LOC_Os03g47360.1, LOC_Os03g47420.1, LOC_Os04g02280.1, LOC_Os06g41520.1, LOC_Os07g09110.1, LOC_Os07g27030.1, LOC_Os07g37080.1, LOC_Os08g13050.1, LOC_Os08g27190.1, LOC_Os08g43220.1, LOC_Os10g24010.1, LOC_Os11g41550.1, LOC_Os11g41560.1, LOC_Os11g41570.1, LOC_Os11g41590.1, LOC_Os12g43730.1, LOC_Os12g43770.1
Poaceae Paspalum vaginatum 24 gene-BS78_01G016600, gene-BS78_01G099800, gene-BS78_K137800 ...
gene-BS78_01G115500, gene-BS78_01G123600, gene-BS78_01G131900, gene-BS78_01G167200, gene-BS78_01G224500, gene-BS78_02G322600, gene-BS78_04G000600, gene-BS78_04G086000, gene-BS78_04G233400, gene-BS78_05G091600, gene-BS78_05G091900, gene-BS78_05G232600, gene-BS78_05G232800, gene-BS78_05G232900, gene-BS78_06G017800, gene-BS78_06G017900, gene-BS78_06G236200, gene-BS78_08G023500, gene-BS78_10G185800, gene-BS78_10G274200, gene-BS78_K331500
Poaceae Puccinellia tenuiflora 56 Pt_Chr0100042, Pt_Chr0101157, Pt_Chr0102105, Pt_Chr0102106 ...
Pt_Chr0103013, Pt_Chr0103031, Pt_Chr0104520, Pt_Chr0104576, Pt_Chr0104613, Pt_Chr0104660, Pt_Chr0104662, Pt_Chr0104663, Pt_Chr0104692, Pt_Chr0106586, Pt_Chr0106611, Pt_Chr0107485, Pt_Chr0200583, Pt_Chr0200585, Pt_Chr0200594, Pt_Chr0200788, Pt_Chr0201674, Pt_Chr0201677, Pt_Chr0202451, Pt_Chr0202466, Pt_Chr0202481, Pt_Chr0202708, Pt_Chr0202917, Pt_Chr0202918, Pt_Chr0206545, Pt_Chr0206546, Pt_Chr0206660, Pt_Chr0206661, Pt_Chr0207352, Pt_Chr0305560, Pt_Chr0307464, Pt_Chr0400254, Pt_Chr0401578, Pt_Chr0401581, Pt_Chr0401597, Pt_Chr0503938, Pt_Chr0504167, Pt_Chr0505255, Pt_Chr0505793, Pt_Chr0505817, Pt_Chr0601011, Pt_Chr0601180, Pt_Chr0604537, Pt_Chr0605437, Pt_Chr0605629, Pt_Chr0700735, Pt_Chr0701166, Pt_Chr0701307, Pt_Chr0701641, Pt_Chr0703699, Pt_Chr0703736, Pt_Chr0704236
Poaceae Sporobolus alterniflorus 23 Chr01G007400, Chr01G016030, Chr01G016370, Chr04G008150 ...
Chr07G003500, Chr07G014660, Chr07G014680, Chr12G020700, Chr12G028590, Chr12G030060, Chr12G030070, Chr16G007830, Chr16G007850, Chr19G010920, Chr19G011300, Chr23G005890, Chr23G018410, Chr26G001370, Chr26G013720, Chr27G004830, Chr27G005170, Chr27G005190, Chr31G007990
Poaceae Thinopyrum elongatum 34 Tel1E01G406000, Tel1E01G430200, Tel1E01G452100 ...
Tel1E01G565900, Tel1E01G566100, Tel1E01G664200, Tel1E01G734700, Tel2E01G006200, Tel2E01G283700, Tel2E01G398000, Tel2E01G993300, Tel3E01G288000, Tel3E01G421100, Tel3E01G832000, Tel3E01G832800, Tel3E01G833100, Tel4E01G050500, Tel4E01G189400, Tel4E01G357100, Tel4E01G377200, Tel4E01G607800, Tel5E01G090700, Tel5E01G091000, Tel5E01G131000, Tel5E01G159600, Tel5E01G454300, Tel6E01G018600, Tel6E01G141200, Tel6E01G178200, Tel7E01G174400, Tel7E01G176700, Tel7E01G204600, Tel7E01G275500, Tel7E01G357400
Poaceae Triticum dicoccoides 9 gene_TRIDC1AG041310, gene_TRIDC1AG041320 ...
gene_TRIDC1BG068810, gene_TRIDC2BG021220, gene_TRIDC3AG071700, gene_TRIDC4BG036330, gene_TRIDC5AG005740, gene_TRIDC5BG006350, gene_TRIDC7AG008390
Poaceae Triticum aestivum 104 TraesCS1A02G261100.1, TraesCS1A02G277800.1 ...
TraesCS1A02G336200.1, TraesCS1A02G336500.1, TraesCS1A02G336700.1, TraesCS1A02G337100.1, TraesCS1A02G420400.1, TraesCS1B02G256800.1, TraesCS1B02G271900.1, TraesCS1B02G286700.1, TraesCS1B02G305400.1, TraesCS1B02G349700.1, TraesCS1B02G439500.1.cds1, TraesCS1D02G261100.1, TraesCS1D02G277000.1, TraesCS1D02G414000.1.cds1, TraesCS1D02G416500.1.cds1, TraesCS1D02G416600.1.cds1, TraesCS2A02G074200.1, TraesCS2A02G074300.1, TraesCS2A02G074400.1, TraesCS2B02G089300.1, TraesCS2B02G089400.1, TraesCS2B02G112900.1.cds1, TraesCS2B02G163700.1, TraesCS2B02G165800.1, TraesCS2B02G208300.1, TraesCS3A02G047300.1, TraesCS3B02G035300.1, TraesCS3B02G035500.1, TraesCS3B02G036300.1, TraesCS3B02G173100.1, TraesCS3B02G278800.1, TraesCS3B02G569600.1, TraesCS3D02G032600.1, TraesCS3D02G154900.1, TraesCS3D02G249700.1, TraesCS3D02G479600.1, TraesCS4A02G088900.1, TraesCS4A02G102800.1, TraesCS4A02G196700.1, TraesCS4A02G234900.1, TraesCS4A02G289100.1, TraesCS4A02G372700.1, TraesCS4A02G399100.1, TraesCS4B02G080100.1, TraesCS4B02G118600.1, TraesCS4B02G201700.1, TraesCS4B02G215400.1, TraesCS4D02G022900.1, TraesCS4D02G023000.1.cds1, TraesCS4D02G023300.1.cds1, TraesCS4D02G079000.1, TraesCS4D02G116300.1, TraesCS4D02G202400.1, TraesCS4D02G215900.1, TraesCS5A02G037300.1, TraesCS5A02G061300.1, TraesCS5A02G061400.1.cds1, TraesCS5A02G080400.1, TraesCS5A02G255400.1, TraesCS5A02G388600.1.cds1, TraesCS5A02G541600.1.cds1, TraesCS5A02G541700.1, TraesCS5A02G551800.1, TraesCS5B02G038200.1, TraesCS5B02G085700.1, TraesCS5B02G393600.1, TraesCS5D02G012700.1.cds1, TraesCS5D02G072800.1, TraesCS5D02G072900.1, TraesCS5D02G073000.2, TraesCS5D02G092100.1, TraesCS5D02G263900.1, TraesCS5D02G292600.1, TraesCS5D02G398600.1, TraesCS6A02G010000.1, TraesCS6A02G026000.1.cds1, TraesCS6A02G055800.1, TraesCS6A02G076500.1, TraesCS6A02G076600.1, TraesCS6B02G006700.1.cds1, TraesCS6B02G039600.1, TraesCS6B02G076500.1, TraesCS6B02G102500.1, TraesCS6B02G102600.1, TraesCS6B02G102700.1, TraesCS6B02G102800.1, TraesCS6D02G004100.1, TraesCS6D02G031000.1, TraesCS6D02G155900.1, TraesCS7A02G101100.1, TraesCS7B02G100900.1, TraesCS7D02G095200.1, TraesCSU02G004800.1.cds1, TraesCSU02G027200.1, TraesCSU02G027300.1, TraesCSU02G027400.1, TraesCSU02G071700.1, TraesCSU02G120200.1, TraesCSU02G120300.1, TraesCSU02G174700.1, TraesCSU02G218100.1.cds1, TraesCSU02G250100.1
Poaceae Zea mays 4 Zm00001eb116750_P003, Zm00001eb312670_P001 ...
Zm00001eb312730_P004, Zm00001eb312790_P001
Poaceae Zoysia japonica 15 nbis-gene-1093, nbis-gene-1480, nbis-gene-18257 ...
nbis-gene-2031, nbis-gene-20371, nbis-gene-3241, nbis-gene-49207, nbis-gene-51459, nbis-gene-51460, nbis-gene-51491, nbis-gene-51499, nbis-gene-52523, nbis-gene-53528, nbis-gene-53908, nbis-gene-53909
Poaceae Zoysia macrostachya 5 Zma_g1493, Zma_g17638, Zma_g19242, Zma_g19259, Zma_g19260
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