Basic Information
Locus ID:
Oco05G018420
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Inositol polyphosphate phosphatase, catalytic domain homologues
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG05 | 22143528 | 22147350 | + | Oco05G018420 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.57 | 37,733.75 Da | 35.93 | 86.17 | -0.27 |
Protein Domain:
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G47510.1 | inositol polyphosphate 5-phosphatase 11. Encodes a phosphatidylinositol polyphosphate 5-phosphatase. It can dephosphorylate PI(4,5)P2, PI(3,5)P2, and PI(3,4,5)P3, but, it is not active against PI(5)P or the water soluble inositol(1,4,5)P3 or inositol(1,3,4,5)P4. The transcript levels for this gene rise in response to auxin, ABA, and JA. | 0 |
| RefSeq | XP_052146372.1 | type IV inositol polyphosphate 5-phosphatase 11 isoform X1 [Oryza glaberrima] | 0 |
| Q5EAF2 | Type IV inositol polyphosphate 5-phosphatase 11 OS=Arabidopsis thaliana OX=3702 GN=IP5P11 PE=1 SV=1 | 0 | |
| TrEMBL | I1PDN0 | IPPc domain-containing protein OS=Oryza glaberrima OX=4538 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg22827 |
| Amaranthaceae | Chenopodium album | 1 | gene:ENSEOMG00000044911 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30046050 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103723945 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT1G47510.1 |
| Brassicaceae | Eutrema salsugineum | 2 | Thhalv10001276m.g.v1.0, Thhalv10011683m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 2 | Sp1g34540.v2.2, Sp7g05230.v2.2 |
| Brassicaceae | Brassica nigra | 1 | BniB04g063540.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq03G1653 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl03G1774 |
| Dunaliellaceae | Dunaliella salina | 1 | Dusal.0445s00008.v1.0 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00026789 |
| Plumbaginaceae | Limonium bicolor | 2 | Lb3G15810, Lb4G24739 |
| Poaceae | Echinochloa crus-galli | 3 | AH01.1192, CH01.1456, CH04.2200 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_3AG0225770, gene-QOZ80_3BG0270670 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.4HG0341090.1 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_062969 |
| Poaceae | Oryza coarctata | 2 | Oco03G010180, Oco05G018420 |
| Poaceae | Oryza sativa | 1 | LOC_Os03g42810.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_01G150200 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0104426 |
| Poaceae | Sporobolus alterniflorus | 4 | Chr01G009890, Chr04G024550, Chr07G023280, Chr12G027050 |
| Poaceae | Thinopyrum elongatum | 1 | Tel4E01G113600 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC4AG038510, gene_TRIDC4BG010860 |
| Poaceae | Triticum aestivum | 3 | TraesCS4A02G244500.1, TraesCS4B02G070500.1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb051200_P003 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-20383 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g3239 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132627952 |
| Solanaceae | Solanum chilense | 1 | SOLCI003582200 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107017256 |