Basic Information
Locus ID:
Oco05G015460
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Protein tyrosine kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG05 | 15755304 | 15761194 | + | Oco05G015460 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.62 | 91,108.53 Da | 50.20 | 79.56 | -0.51 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06410 | PB1_UP2 | 6 | 100 | 4.01846E-42 | - |
| CDD | cd13999 | STKc_MAP3K-like | 544 | 801 | 3.36623E-107 | - |
| Pfam | PF00564 | PB1 domain | 19 | 88 | 2.9E-12 | IPR000270 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 541 | 801 | 5.6E-61 | IPR001245 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 18 | 107 | 1.44E-20 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 526 | 799 | 3.6E-75 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 531 | 625 | 6.6E-23 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 23 | 100 | 7.9E-7 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 626 | 815 | 6.8E-54 | - |
| SMART | SM00666 | PB1_new | 17 | 102 | 2.2E-23 | IPR000270 |
| SMART | SM00220 | serkin_6 | 538 | 805 | 1.7E-52 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 538 | 805 | 40.852219 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 544 | 565 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 663 | 675 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 620 | 633 | 9.1E-14 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 657 | 675 | 9.1E-14 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 772 | 794 | 9.1E-14 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 728 | 750 | 9.1E-14 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 255 | 284 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 418 | 496 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 264 | 280 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 427 | 455 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 456 | 470 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G24715.1 | Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain. | 0 |
| RefSeq | XP_052146594.1 | uncharacterized protein LOC127765691 isoform X1 [Oryza glaberrima] | 0 |
| Q9SAJ2 | RAF-like serine/threonine-protein kinase 20 OS=Arabidopsis thaliana OX=3702 GN=RAF20 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0D3FJJ2 | Protein kinase domain-containing protein OS=Oryza barthii OX=65489 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology