Basic Information
Locus ID:
Oco05G015330
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Short Name:
CAX2
Description:
Belongs to the Ca(2 ) cation antiporter (CaCA) (TC 2.A.19) family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG05 | 15539549 | 15543678 | + | Oco05G015330 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.18 | 52,750.37 Da | 42.80 | 114.33 | 0.59 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01699 | Sodium/calcium exchanger protein | 285 | 424 | 3.3E-20 | IPR004837 |
| Pfam | PF01699 | Sodium/calcium exchanger protein | 97 | 252 | 1.2E-20 | IPR004837 |
| Gene3D | G3DSA:1.20.1420.30 | - | 126 | 271 | 1.3E-16 | IPR044880 |
| Gene3D | G3DSA:1.20.1420.30 | - | 274 | 428 | 1.5E-18 | IPR044880 |
| TIGRFAM | TIGR00846 | caca2: calcium/proton exchanger | 65 | 427 | 6.6E-120 | - |
| TIGRFAM | TIGR00378 | cax: calcium/proton exchanger | 77 | 427 | 4.8E-105 | IPR004798 |
| Coils | Coil | Coil | 263 | 283 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G55730.1 | cation exchanger 5. member of Low affinity calcium antiporter CAX2 family | 0 |
| RefSeq | XP_052150019.1 | vacuolar cation/proton exchanger 2 isoform X3 [Oryza glaberrima] | 0 |
| Q5KQN0 | Vacuolar cation/proton exchanger 2 OS=Oryza sativa subsp. japonica OX=39947 GN=CAX2 PE=2 SV=2 | 0 | |
| TrEMBL | I1PC15 | Vacuolar cation/proton exchanger OS=Oryza glaberrima OX=4538 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology