halophFGD

Basic Information

Locus ID: Oco05G014870

Species & Taxonomic ID: Oryza coarctata & 77588

Genome Assembly: GCA_030770085.1

Description:

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
LG05	14850354	14852068	-	Oco05G014870

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
7.62	40,415.79 Da	59.47	89.18	-0.06

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF00646	F-box domain	6	50	4.1E-5	IPR001810
SUPERFAMILY	SSF81383	F-box domain	8	63	3.53E-11	IPR036047
Gene3D	G3DSA:1.20.1280.50	-	2	52	4.0E-6	-
SMART	SM00256	fbox_2	11	52	6.2E-6	IPR001810

Gene Ontology

Molecular Function:

GO:0005515 (protein binding)

Best hit

Source	Best Hit ID	Description	E-value
RefSeq	XP_015611464.1	uncharacterized protein LOC4346730 [Oryza sativa Japonica Group]	0
TrEMBL	A0A0E0NVW9	F-box domain-containing protein OS=Oryza rufipogon OX=4529 PE=4 SV=1	0

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Poaceae	Oryza coarctata	2	Oco05G014870, Oco06G015260