Basic Information
Locus ID:
Oco05G014210
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
A Receptor for Ubiquitination Targets
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG05 | 14142525 | 14143835 | - | Oco05G014210 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.24 | 47,423.91 Da | 61.05 | 75.01 | -0.44 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 65 | 101 | 3.2E-8 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 64 | 116 | 5.89E-14 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 64 | 102 | 6.3E-10 | - |
| SMART | SM00256 | fbox_2 | 66 | 106 | 3.0E-8 | IPR001810 |
| TIGRFAM | TIGR01640 | F_box_assoc_1: F-box protein interaction domain | 185 | 353 | 2.5E-13 | IPR017451 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 60 | 107 | 10.610234 | IPR001810 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 37 | 55 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 65 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G15660.1 | F-box and associated interaction domains-containing protein. | 0 |
| RefSeq | XP_015629064.1 | putative F-box protein At2g02030 isoform X3 [Oryza sativa Japonica Group] | 0 |
| Q9LFW0 | Putative F-box protein At5g15660 OS=Arabidopsis thaliana OX=3702 GN=At5g15660 PE=4 SV=1 | 0 | |
| TrEMBL | A0A0E0NVH2 | F-box domain-containing protein OS=Oryza rufipogon OX=4529 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology