Basic Information
Locus ID:
Oco05G012090
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Short Name:
CIPK3
Description:
Non-specific serine threonine protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG05 | 11971131 | 11977067 | - | Oco05G012090 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.47 | 54,141.72 Da | 31.36 | 87.27 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd12195 | CIPK_C | 346 | 460 | 2.20672E-50 | - |
| CDD | cd14663 | STKc_SnRK3 | 19 | 301 | 1.39905E-174 | - |
| Pfam | PF03822 | NAF domain | 342 | 401 | 4.5E-21 | IPR004041 |
| Pfam | PF00069 | Protein kinase domain | 20 | 302 | 1.0E-69 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 16 | 344 | 7.55E-87 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 10 | 98 | 9.1E-26 | - |
| Gene3D | G3DSA:3.30.310.80 | Kinase associated domain 1, KA1 | 339 | 464 | 3.7E-53 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 127 | 309 | 1.4E-61 | - |
| SMART | SM00220 | serkin_6 | 20 | 302 | 1.0E-92 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 20 | 302 | 50.449207 | IPR000719 |
| ProSiteProfiles | PS50816 | NAF domain profile. | 340 | 364 | 12.356663 | IPR018451 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 166 | 178 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 26 | 49 | - | IPR017441 |
| Coils | Coil | Coil | 476 | 476 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Pathway:
ko04068 (FoxO signaling pathway)
map04068 (FoxO signaling pathway)
ko04140 (Autophagy - animal)
map04140 (Autophagy - animal)
ko04150 (mTOR signaling pathway)
map04150 (mTOR signaling pathway)
ko04151 (PI3K-Akt signaling pathway)
map04151 (PI3K-Akt signaling pathway)
ko04152 (AMPK signaling pathway)
map04152 (AMPK signaling pathway)
ko04211 (Longevity regulating pathway)
map04211 (Longevity regulating pathway)
ko04213 (Longevity regulating pathway - multiple species)
map04213 (Longevity regulating pathway - multiple species)
ko04371 (Apelin signaling pathway)
map04371 (Apelin signaling pathway)
ko04710 (Circadian rhythm)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G26980.3 | CBL-interacting protein kinase 3. encodes a serine-threonine protein kinase whose expression increases in response to abscisic acid, cold, drought, high salt, and wounding conditions. The gene is expressed in developing seeds and seedlings. Lines carrying a T-DNA insertions have reduced germination efficiency and expression of cold, high-salt, and abscisic acid marker genes are altered, but not drought-response markers. | 0 |
| RefSeq | XP_052148196.1 | CBL-interacting protein kinase 31 isoform X1 [Oryza glaberrima] | 0 |
| Q6X4A2 | CBL-interacting protein kinase 31 OS=Oryza sativa subsp. japonica OX=39947 GN=CIPK31 PE=1 SV=1 | 0 | |
| TrEMBL | B3GLZ7 | non-specific serine/threonine protein kinase OS=Oryza sativa subsp. japonica OX=39947 GN=CIPK3 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology