Basic Information
Locus ID:
Oco05G009780
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG05 | 9853405 | 9862216 | + | Oco05G009780 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.87 | 107,283.73 Da | 45.88 | 80.67 | -0.37 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd15489 | PHD_SF | 716 | 778 | 0.0011264 | - |
| Pfam | PF16135 | Tify domain binding domain | 48 | 104 | 2.1E-8 | IPR032308 |
| Pfam | PF16135 | Tify domain binding domain | 360 | 411 | 1.1E-8 | IPR032308 |
| Pfam | PF16135 | Tify domain binding domain | 609 | 659 | 6.1E-15 | IPR032308 |
| SUPERFAMILY | SSF55729 | Acyl-CoA N-acyltransferases (Nat) | 821 | 946 | 9.7E-11 | IPR016181 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 667 | 790 | 3.5E-5 | IPR013083 |
| Gene3D | G3DSA:3.40.630.30 | - | 815 | 969 | 1.5E-7 | - |
| SMART | SM00249 | PHD_3 | 716 | 779 | 0.0017 | IPR001965 |
| ProSiteProfiles | PS51186 | Gcn5-related N-acetyltransferase (GNAT) domain profile. | 813 | 966 | 12.643839 | IPR000182 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 112 | 132 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 458 | 479 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 505 | 544 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 508 | 544 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 459 | 479 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G37520.1 | Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain. | 0 |
| RefSeq | XP_015632581.1 | uncharacterized protein LOC9267832 isoform X2 [Oryza sativa Japonica Group] | 0 |
| TrEMBL | I1PA18 | N-acetyltransferase domain-containing protein OS=Oryza glaberrima OX=4538 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology