Basic Information
Locus ID:
Oco05G009310
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Protein tyrosine kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG05 | 9299932 | 9303177 | - | Oco05G009310 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.82 | 61,473.82 Da | 51.51 | 79.14 | -0.37 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 233 | 502 | 8.49813E-107 | - |
| Pfam | PF00069 | Protein kinase domain | 230 | 499 | 7.9E-48 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 206 | 501 | 9.31E-82 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 197 | 302 | 1.5E-38 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 303 | 518 | 4.0E-60 | - |
| SMART | SM00220 | serkin_6 | 227 | 502 | 4.0E-39 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 227 | 502 | 37.785141 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 233 | 256 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 347 | 359 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 13 | 34 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 526 | 561 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 538 | 561 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 16 | 34 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G24550.1 | proline extensin-like receptor kinase 1. encodes an ortholog of Brassica napus proline extensin-like receptor kinase. Expression of the brassica gene is induced by wounding and fungal infection. | 0 |
| RefSeq | XP_015629414.1 | proline-rich receptor-like protein kinase PERK1 [Oryza sativa Japonica Group] | 0 |
| Q9LV48 | Proline-rich receptor-like protein kinase PERK1 OS=Arabidopsis thaliana OX=3702 GN=PERK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0D3FGQ6 | Protein kinase domain-containing protein OS=Oryza barthii OX=65489 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 4 | AH01.4204, BH01.4522, CH01.202, CH01.4819 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_3AG0242550, gene-QOZ80_3BG0285630 |
| Poaceae | Oryza coarctata | 1 | Oco05G009310 |
| Poaceae | Oryza sativa | 3 | LOC_Os03g16260.1, LOC_Os03g38710.1, LOC_Os09g14580.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_01G404200 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g1549 |