Basic Information
Locus ID:
Oco05G006760
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Belongs to the glycosyl hydrolase 17 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG05 | 6567591 | 6571782 | + | Oco05G006760 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.48 | 57,194.63 Da | 37.55 | 92.08 | 0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07983 | X8 domain | 366 | 436 | 6.5E-18 | IPR012946 |
| Pfam | PF00332 | Glycosyl hydrolases family 17 | 28 | 348 | 5.5E-79 | IPR000490 |
| SUPERFAMILY | SSF51445 | (Trans)glycosidases | 28 | 349 | 5.72E-84 | IPR017853 |
| Gene3D | G3DSA:1.20.58.1040 | - | 359 | 460 | 1.6E-9 | - |
| Gene3D | G3DSA:3.20.20.80 | Glycosidases | 27 | 354 | 2.0E-113 | - |
| SMART | SM00768 | X8_cls | 365 | 458 | 3.7E-46 | IPR012946 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G01630.1 | O-Glycosyl hydrolases family 17 protein. | 0 |
| RefSeq | XP_015628658.1 | glucan endo-1,3-beta-glucosidase 3 isoform X1 [Oryza sativa Japonica Group] | 0 |
| Q9ZU91 | Glucan endo-1,3-beta-glucosidase 3 OS=Arabidopsis thaliana OX=3702 GN=At2g01630 PE=2 SV=2 | 0 | |
| TrEMBL | A3AFL0 | Os03g0221500 protein OS=Oryza sativa subsp. japonica OX=39947 GN=OJ1743A09.5 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology