Basic Information
Locus ID:
Oco05G006740
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Homocysteine S-methyltransferase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG05 | 6550152 | 6553200 | + | Oco05G006740 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.91 | 35,852.78 Da | 42.04 | 92.31 | -0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02574 | Homocysteine S-methyltransferase | 17 | 316 | 1.4E-70 | IPR003726 |
| SUPERFAMILY | SSF82282 | Homocysteine S-methyltransferase | 12 | 321 | 4.05E-76 | IPR036589 |
| Gene3D | G3DSA:3.20.20.330 | - | 4 | 316 | 2.6E-94 | IPR036589 |
| PIRSF | PIRSF037505 | BHMT | 272 | 327 | 4.5 | IPR017226 |
| PIRSF | PIRSF037505 | BHMT | 2 | 253 | 5.3E-5 | IPR017226 |
| ProSiteProfiles | PS50970 | Homocysteine-binding domain profile. | 4 | 318 | 47.905212 | IPR003726 |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G25900.1 | Homocysteine S-methyltransferase family protein. | 0 |
| RefSeq | XP_015632081.1 | homocysteine S-methyltransferase 1 [Oryza sativa Japonica Group] | 0 |
| Q9FUN0 | Homocysteine S-methyltransferase 1 OS=Zea mays OX=4577 GN=HMT-1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0E0KAN4 | Hcy-binding domain-containing protein OS=Oryza punctata OX=4537 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology