Basic Information
Locus ID:
Oco05G005810
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG05 | 5641509 | 5644998 | + | Oco05G005810 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.67 | 53,999.84 Da | 49.74 | 98.27 | -0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 11 | 44 | 6.1E-6 | IPR001810 |
| SUPERFAMILY | SSF52047 | RNI-like | 141 | 300 | 3.92E-12 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 9 | 59 | 6.93E-8 | IPR036047 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 49 | 329 | 1.4E-8 | IPR032675 |
| Gene3D | G3DSA:1.20.1280.50 | - | 5 | 48 | 2.2E-5 | - |
| ProSiteProfiles | PS50181 | F-box domain profile. | 8 | 44 | 8.967582 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_052149393.1 | F-box/LRR-repeat protein 13-like [Oryza glaberrima] | 0 |
| TrEMBL | A0A0E0KA85 | F-box domain-containing protein OS=Oryza punctata OX=4537 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology