Basic Information
Locus ID:
Oco05G002730
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG05 | 2544027 | 2547155 | - | Oco05G002730 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.57 | 110,222.57 Da | 33.05 | 101.44 | 0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 201 | 255 | 2.1E-6 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 722 | 993 | 8.9E-35 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 37 | 77 | 7.8E-11 | IPR013210 |
| SUPERFAMILY | SSF52047 | RNI-like | 261 | 602 | 6.83E-70 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 718 | 996 | 3.01E-61 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 64 | 314 | 2.35E-51 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 811 | 1019 | 3.0E-49 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 151 | 218 | 1.3E-17 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 219 | 387 | 1.7E-54 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 388 | 629 | 1.3E-63 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 38 | 150 | 1.4E-26 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 710 | 810 | 5.9E-16 | - |
| SMART | SM00369 | LRR_typ_2 | 199 | 223 | 0.89 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 559 | 583 | 230.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 295 | 319 | 110.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 439 | 463 | 42.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 343 | 367 | 25.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 511 | 535 | 310.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 464 | 487 | 190.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 720 | 996 | 7.8E-21 | IPR000719 |
| ProSiteProfiles | PS51257 | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 27 | 5.0 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 720 | 1003 | 31.340038 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 857 | 869 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 726 | 750 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 511 | 524 | 8.6E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 202 | 215 | 8.6E-5 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 998 | 1018 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G28650.1 | Leucine-rich repeat transmembrane protein kinase family protein. | 0 |
| RefSeq | XP_040378700.1 | MDIS1-interacting receptor like kinase 1-like [Oryza brachyantha] | 0 |
| Q9M0G7 | MDIS1-interacting receptor like kinase 1 OS=Arabidopsis thaliana OX=3702 GN=MIK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6G1DNQ8 | Protein kinase domain-containing protein OS=Oryza meyeriana var. granulata OX=110450 GN=E2562_024606 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology