Basic Information
Locus ID:
Oco05G001520
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG05 | 1429650 | 1433843 | + | Oco05G001520 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.11 | 58,062.48 Da | 46.16 | 86.14 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 217 | 483 | 5.81325E-106 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 214 | 482 | 1.7E-47 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 190 | 485 | 6.47E-81 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 287 | 494 | 4.5E-63 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 183 | 286 | 9.0E-34 | - |
| SMART | SM00220 | serkin_6 | 211 | 489 | 1.7E-34 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 211 | 488 | 37.445927 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 217 | 239 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 333 | 345 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 110 | 188 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 147 | 187 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 493 | 523 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G01540.2 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_015632491.1 | probable serine/threonine-protein kinase At1g01540 [Oryza sativa Japonica Group] | 0 |
| Q3EDL4 | Probable serine/threonine-protein kinase At1g01540 OS=Arabidopsis thaliana OX=3702 GN=At1g01540 PE=1 SV=2 | 0 | |
| TrEMBL | Q10SE3 | Os03g0125600 protein OS=Oryza sativa subsp. japonica OX=39947 GN=LOC_Os03g03410 PE=1 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology