Basic Information
Locus ID:
Oco05G001280
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
NAC domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG05 | 1182228 | 1183236 | + | Oco05G001280 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.37 | 22,549.67 Da | 53.33 | 71.53 | -0.64 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14358 | UBA_NAC_euk | 172 | 208 | 1.71418E-17 | - |
| Pfam | PF19026 | HYPK UBA domain | 170 | 208 | 2.4E-12 | IPR044034 |
| Pfam | PF01849 | NAC domain | 69 | 124 | 3.7E-20 | IPR002715 |
| Gene3D | G3DSA:2.20.70.30 | - | 75 | 128 | 2.8E-29 | IPR038187 |
| Gene3D | G3DSA:1.10.8.10 | - | 170 | 207 | 1.3E-19 | - |
| SMART | SM01407 | NAC_2 | 69 | 125 | 1.8E-23 | IPR002715 |
| ProSiteProfiles | PS51151 | NAC A/B domain profile. | 66 | 131 | 17.528908 | IPR002715 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 77 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 32 | 56 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G12390.1 | Nascent polypeptide-associated complex (NAC), alpha subunit family protein. | 0 |
| RefSeq | XP_015631186.1 | nascent polypeptide-associated complex subunit alpha-like protein 1 [Oryza sativa Japonica Group] | 0 |
| Q9LHG9 | Nascent polypeptide-associated complex subunit alpha-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=At3g12390 PE=1 SV=1 | 0 | |
| TrEMBL | B9FAI7 | Os03g0121700 protein OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0121700 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology