Basic Information
Locus ID:
Oco04G024980
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Monogalactosyldiacylglycerol (MGDG) synthase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG04 | 28478880 | 28483193 | + | Oco04G024980 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.88 | 55,954.72 Da | 41.99 | 87.26 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17507 | GT28_Beta-DGS-like | 98 | 476 | 5.5497E-151 | - |
| Pfam | PF06925 | Monogalactosyldiacylglycerol (MGDG) synthase | 109 | 277 | 3.5E-57 | IPR009695 |
| Pfam | PF04101 | Glycosyltransferase family 28 C-terminal domain | 305 | 434 | 1.6E-10 | IPR007235 |
| SUPERFAMILY | SSF53756 | UDP-Glycosyltransferase/glycogen phosphorylase | 98 | 474 | 1.27E-25 | - |
| Gene3D | G3DSA:3.40.50.2000 | Glycogen Phosphorylase B; | 285 | 458 | 2.8E-28 | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G20410.1 | monogalactosyldiacylglycerol synthase 2. Encodes a type B monogalactosyldiacylglycerol (MGDG) synthase. Strongly induced by phosphate deprivation, and in non-photosynthetic tissues. Does not contribute to galactolipid synthesis under Pi-sufficient conditions but does under Pi starvation. | 0 |
| RefSeq | XP_015627712.1 | probable monogalactosyldiacylglycerol synthase 3, chloroplastic [Oryza sativa Japonica Group] | 0 |
| Q0DWQ1 | Probable monogalactosyldiacylglycerol synthase 3, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=MGD3 PE=3 SV=2 | 0 | |
| TrEMBL | A0A6G1F9M1 | monogalactosyldiacylglycerol synthase OS=Oryza meyeriana var. granulata OX=110450 GN=E2562_018594 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology