Basic Information
Locus ID:
Oco04G018440
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Major Facilitator Superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG04 | 21963186 | 21966043 | + | Oco04G018440 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.97 | 46,395.71 Da | 39.29 | 106.93 | 0.66 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07690 | Major Facilitator Superfamily | 10 | 380 | 2.1E-21 | IPR011701 |
| SUPERFAMILY | SSF103473 | MFS general substrate transporter | 10 | 423 | 2.49E-34 | IPR036259 |
| Gene3D | G3DSA:1.20.1250.20 | MFS general substrate transporter like domains | 7 | 424 | 3.1E-35 | IPR036259 |
| ProSiteProfiles | PS50850 | Major facilitator superfamily (MFS) profile. | 1 | 192 | 10.909593 | IPR020846 |
| PRINTS | PR01035 | Tetracycline resistance protein signature | 50 | 69 | 1.8E-6 | IPR001958 |
| PRINTS | PR01035 | Tetracycline resistance protein signature | 143 | 165 | 1.8E-6 | IPR001958 |
| PRINTS | PR01035 | Tetracycline resistance protein signature | 364 | 387 | 1.8E-6 | IPR001958 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G42210.1 | Major facilitator superfamily protein. | 0 |
| RefSeq | XP_052143812.1 | uncharacterized protein LOC127763212 [Oryza glaberrima] | 0 |
| Q96MC6 | Hippocampus abundant transcript 1 protein OS=Homo sapiens OX=9606 GN=MFSD14A PE=1 SV=2 | 0 | |
| TrEMBL | A0A6G1F654 | MFS domain-containing protein OS=Oryza meyeriana var. granulata OX=110450 GN=E2562_009562 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology