Basic Information
Locus ID:
Oco04G013480
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Kelch motif
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG04 | 17194524 | 17197744 | - | Oco04G013480 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.23 | 28,177.31 Da | 50.20 | 61.57 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01344 | Kelch motif | 77 | 112 | 4.4E-9 | IPR006652 |
| SUPERFAMILY | SSF117281 | Kelch motif | 77 | 257 | 1.57E-20 | IPR015915 |
| SUPERFAMILY | SSF81383 | F-box domain | 2 | 44 | 2.62E-6 | IPR036047 |
| Gene3D | G3DSA:2.120.10.80 | - | 10 | 255 | 8.2E-21 | IPR015915 |
| SMART | SM00612 | kelc_smart | 78 | 125 | 5.5E-7 | IPR006652 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G15670.1 | Galactose oxidase/kelch repeat superfamily protein. | 0 |
| RefSeq | XP_015699105.2 | F-box/kelch-repeat protein At2g44130-like [Oryza brachyantha] | 0 |
| Q9LMR5 | F-box/kelch-repeat protein At1g15670 OS=Arabidopsis thaliana OX=3702 GN=At1g15670 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0E0K190 | F-box domain-containing protein OS=Oryza punctata OX=4537 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology