Basic Information
Locus ID:
Oco04G010650
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Inositol polyphosphate phosphatase, catalytic domain homologues
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG04 | 13660245 | 13666689 | + | Oco04G010650 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.45 | 119,585.50 Da | 50.73 | 76.22 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03372 | Endonuclease/Exonuclease/phosphatase family | 584 | 908 | 3.4E-17 | IPR005135 |
| SUPERFAMILY | SSF56219 | DNase I-like | 556 | 940 | 1.7E-58 | IPR036691 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 188 | 561 | 5.49E-22 | IPR036322 |
| Gene3D | G3DSA:3.60.10.10 | Endonuclease/exonuclease/phosphatase | 561 | 946 | 3.4E-99 | IPR036691 |
| Gene3D | G3DSA:2.130.10.10 | - | 425 | 560 | 1.1E-10 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 157 | 318 | 8.3E-8 | IPR015943 |
| SMART | SM00320 | WD40_4 | 257 | 295 | 1.8 | IPR001680 |
| SMART | SM00320 | WD40_4 | 213 | 251 | 71.0 | IPR001680 |
| SMART | SM00128 | i5p_5 | 577 | 923 | 1.2E-85 | IPR000300 |
| SMART | SM00320 | WD40_4 | 435 | 473 | 26.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 475 | 512 | 13.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 514 | 551 | 230.0 | IPR001680 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 111 | 161 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 26 | 92 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 38 | 52 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 53 | 78 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G43900.1 | Endonuclease/exonuclease/phosphatase family protein. | 0 |
| RefSeq | XP_052144565.1 | type II inositol polyphosphate 5-phosphatase 15-like [Oryza glaberrima] | 0 |
| O80560 | Type I inositol polyphosphate 5-phosphatase 12 OS=Arabidopsis thaliana OX=3702 GN=IP5P12 PE=1 SV=2 | 0 | |
| TrEMBL | E5RT37 | Inositol polyphosphate 5-phosphatase OS=Oryza sativa subsp. japonica OX=39947 GN=D50 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology