Basic Information
Locus ID:
Oco04G009910
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Legume lectin domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG04 | 12224942 | 12226963 | + | Oco04G009910 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.00 | 72,191.74 Da | 47.70 | 88.11 | 0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06899 | lectin_legume_LecRK_Arcelin_ConA | 34 | 267 | 9.24709E-73 | IPR001220 |
| Pfam | PF00069 | Protein kinase domain | 368 | 568 | 2.4E-37 | IPR000719 |
| Pfam | PF00139 | Legume lectin domain | 33 | 266 | 2.0E-44 | IPR001220 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 349 | 630 | 3.46E-69 | IPR011009 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 23 | 267 | 6.06E-48 | IPR013320 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 443 | 644 | 3.2E-55 | - |
| Gene3D | G3DSA:2.60.120.200 | - | 26 | 273 | 4.7E-51 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 326 | 442 | 8.9E-22 | - |
| SMART | SM00220 | serkin_6 | 365 | 631 | 2.8E-29 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 365 | 638 | 33.771088 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 371 | 394 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 487 | 499 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 272 | 299 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 276 | 295 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G42120.1 | Concanavalin A-like lectin protein kinase family protein. | 0 |
| RefSeq | XP_015624294.1 | probable L-type lectin-domain containing receptor kinase S.7 [Oryza sativa Japonica Group] | 0 |
| A0A0P0VIP0 | L-type lectin-domain containing receptor kinase S.7 OS=Oryza sativa subsp. japonica OX=39947 GN=LECRKS7 PE=1 SV=1 | 0 | |
| TrEMBL | I1P060 | Protein kinase domain-containing protein OS=Oryza glaberrima OX=4538 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology