halophFGD

Basic Information

Locus ID: Oco04G008240

Species & Taxonomic ID: Oryza coarctata & 77588

Genome Assembly: GCA_030770085.1

Description:

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
LG04	8417565	8431889	+	Oco04G008240

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
8.61	42,104.39 Da	56.60	89.75	-0.05

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF12937	F-box-like	10	46	2.0E-6	IPR001810
SUPERFAMILY	SSF81383	F-box domain	10	63	6.67E-12	IPR036047
Gene3D	G3DSA:1.20.1280.50	-	9	45	6.0E-7	-

Gene Ontology

Molecular Function:

GO:0005515 (protein binding)

Best hit

Source	Best Hit ID	Description	E-value
RefSeq	XP_044330026.1	uncharacterized protein LOC123051257 [Triticum aestivum]	0
TrEMBL	A0A0A8XPR0	F-box domain-containing protein OS=Arundo donax OX=35708 PE=4 SV=1	0

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Poaceae	Echinochloa crus-galli	7	AH07.1321, AH07.1441, BH07.1366, BH07.1368, BH07.1405 ... BH07.1412, CH07.1116
Poaceae	Eleusine coracana subsp. coracana	5	gene-QOZ80_2AG0109700, gene-QOZ80_2AG0110130 ... gene-QOZ80_2BG0163560, gene-QOZ80_2BG0163600, gene-QOZ80_2BG0163610
Poaceae	Hordeum vulgare	8	HORVU.MOREX.r3.3HG0314030.1, HORVU.MOREX.r3.6HG0542260.1 ... HORVU.MOREX.r3.4HG0387160.1.CDS1, HORVU.MOREX.r3.6HG0542100.1.CDS1, HORVU.MOREX.r3.6HG0553610.1, HORVU.MOREX.r3.6HG0555260.1, HORVU.MOREX.r3.7HG0726220.1, HORVU.MOREX.r3.7HG0740520.1.CDS1
Poaceae	Lolium multiflorum	19	gene-QYE76_013410, gene-QYE76_019256, gene-QYE76_020131 ... gene-QYE76_024738, gene-QYE76_026078, gene-QYE76_026079, gene-QYE76_026081, gene-QYE76_026292, gene-QYE76_026293, gene-QYE76_026294, gene-QYE76_026295, gene-QYE76_034976, gene-QYE76_035321, gene-QYE76_035751, gene-QYE76_036498, gene-QYE76_036499, gene-QYE76_059643, gene-QYE76_063286, gene-QYE76_068969
Poaceae	Oryza coarctata	4	Oco03G007890, Oco04G008240, Oco04G008250, Oco04G008270
Poaceae	Oryza sativa	2	LOC_Os02g18614.1, LOC_Os02g18720.1
Poaceae	Paspalum vaginatum	4	gene-BS78_04G123700, gene-BS78_K094100, gene-BS78_K243000 ... gene-BS78_K244100
Poaceae	Puccinellia tenuiflora	24	Pt_Chr0200702, Pt_Chr0200703, Pt_Chr0200704, Pt_Chr0200706 ... Pt_Chr0200831, Pt_Chr0203811, Pt_Chr0204699, Pt_Chr0204703, Pt_Chr0204715, Pt_Chr0204716, Pt_Chr0204724, Pt_Chr0204725, Pt_Chr0300307, Pt_Chr0306953, Pt_Chr0307077, Pt_Chr0401444, Pt_Chr0401446, Pt_Chr0404219, Pt_Chr0404221, Pt_Chr0503491, Pt_Chr0505179, Pt_Chr0505426, Pt_Chr0601041, Pt_Chr0704558
Poaceae	Sporobolus alterniflorus	3	Chr06G031510, Chr09G000780, Chr15G022780
Poaceae	Thinopyrum elongatum	22	Tel1E01G645700, Tel2E01G134600, Tel2E01G148100 ... Tel3E01G188900, Tel3E01G681600, Tel3E01G723100, Tel3E01G752900, Tel4E01G635600, Tel5E01G568900, Tel6E01G039000, Tel6E01G043500, Tel6E01G044200, Tel6E01G045100, Tel6E01G048200, Tel6E01G071100, Tel6E01G122100, Tel6E01G158400, Tel6E01G167200, Tel6E01G215200, Tel6E01G226200, Tel7E01G465900, Tel7E01G848600
Poaceae	Triticum dicoccoides	9	gene_TRIDC1AG057960, gene_TRIDC1BG017590 ... gene_TRIDC1BG066740, gene_TRIDC3AG064480, gene_TRIDC3BG072760, gene_TRIDC6AG012980, gene_TRIDC6BG003780, gene_TRIDC6BG018120, gene_TRIDC6BG018180
Poaceae	Triticum aestivum	62	TraesCS1A02G393700.1, TraesCS1B02G083300.1 ... TraesCS1B02G423000.1, TraesCS1D02G065900.1, TraesCS1D02G402800.1, TraesCS2A02G058400.1, TraesCS2D02G057400.2, TraesCS3A02G109100.1, TraesCS3A02G428600.1.cds1, TraesCS3A02G456400.1, TraesCS3A02G456500.1, TraesCS3B02G128100.1, TraesCS3B02G466200.1.cds1, TraesCS3B02G496600.2, TraesCS3B02G496700.1, TraesCS3B02G496900.1.cds1, TraesCS3B02G497000.1, TraesCS3B02G497100.1, TraesCS3D02G110900.2, TraesCS3D02G449500.1, TraesCS3D02G449600.1, TraesCS3D02G449700.1.cds1, TraesCS3D02G449800.1, TraesCS4B02G391600.1, TraesCS4B02G392900.1, TraesCS5B02G357900.1, TraesCS5D02G363100.1, TraesCS5D02G363300.1, TraesCS5D02G497500.1, TraesCS6A02G010800.1, TraesCS6A02G023800.1.cds1, TraesCS6A02G023900.1, TraesCS6A02G047800.1, TraesCS6A02G100400.1, TraesCS6B02G017300.1, TraesCS6B02G019500.1.cds1, TraesCS6B02G032500.1, TraesCS6B02G032600.1, TraesCS6B02G032800.1, TraesCS6B02G095400.1, TraesCS6B02G095500.1, TraesCS6B02G120000.1, TraesCS6B02G120300.1, TraesCS6B02G128400.1, TraesCS6B02G128500.1, TraesCS6D02G023200.1, TraesCS6D02G027100.1, TraesCS6D02G027200.1, TraesCS6D02G027300.1, TraesCS6D02G027500.1, TraesCS6D02G044000.1, TraesCS6D02G055300.1, TraesCS6D02G069200.1, TraesCS6D02G080600.1, TraesCS6D02G080900.1, TraesCS7A02G496900.1, TraesCS7B02G400700.1.cds1, TraesCS7B02G481600.2, TraesCS7D02G483700.1, TraesCS7D02G484000.1, TraesCS7D02G484100.1.cds1, TraesCSU02G034900.1
Poaceae	Zea mays	1	Zm00001eb236980_P001
Poaceae	Zoysia japonica	3	nbis-gene-34074, nbis-gene-34088, nbis-gene-45205
Poaceae	Zoysia macrostachya	3	Zma_g12614, Zma_g15308, Zma_g15320